Gluten Free Apple Muffins | Chunky, Moist, Tender


Prep Time : 10 minutes

Cook Time : 22 minutes

These gluten free apple muffins are perfectly spiced, with plenty of diced apples inside plus sour cream for a moist, tender crumb.

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gluten free apple muffins

These perfectly spiced gluten free apple muffins have two whole diced apples inside, and they’re made extra tender with sour cream in the batter. Plus, they freeze really well, and can easily be made dairy free, too!

White bowl with light brown apple muffins in brown papers with front apple on its side

Why I love these gluten free apple muffins

This simple recipe is essentially just a sour cream-based muffin batter with diced fresh apple chunks folded into the batter in much the same way as you might add chocolate chips. Here’s what else I love about these muffins:

  • Super tender crumb: Apple chunks that release some moisture as they bake away plus sour cream in the batter make for a super tender crumb.
  • Lots of flavor: Nearly 2 whole apples in the batter and on top add lots of apple flavor without being overly sweet; a touch of cinnamon adds more flavor and aroma.
  • Quick & easy: Once you’ve peeled, cored & diced the apples, the muffins practically make themselves!
Gluten free apple muffins ingredients in small bowls on light tan wood table

Ingredients you’ll need & substitution suggestions

  • Gluten free flour blend: Be sure to use one of my recommended blends, and add xanthan gum if your blend doesn’t already contain it. A well-balanced, superfine blend of flours makes all the difference.
  • Baking powder/baking soda: Help the muffins rise and help them brown lightly in the oven. Make sure yours are fresh!
  • Salt: Balances the sweetness and brings out the flavors.
  • Cinnamon (and maybe nutmeg): The classic spice to pair with apples; if you have it, add some freshly grated nutmeg, too.
  • Granulated sugar: Adds sweetness but also helps keep the muffins tender.
  • Apples: The best apples for baking are usually Granny Smith, since they’re sweet, tart, and have a nice firm texture that never gets mushy during baking. Braeburn, Cortland, Empire or Pink Lady apples also work well.
  • Cornstarch: We toss the diced apples with a bit of starch to absorb some moisture and avoid mushiness. If you can’t have cornstarch, try potato starch or arrowroot.
  • Butter: Adds flavor, and helps keep the muffins tender. If you’re dairy free, replace with vegan butter (Miyoko’s Kitchen brand is my favorite) or virgin coconut oil.
  • Sour cream: Adds richness and makes for a really tender crumb. You can use Greek-style plain yogurt in its place. If you’re dairy free, replace with your favorite dairy free sour cream alternative or nondairy Greek yogurt.
  • Eggs: Help the muffins rise, add texture and structure. If you’re egg-free, try using 2 “chia eggs” (2 tablespoons ground white chia seeds + 2 tablespoons water, mixed and allowed to gel).
  • Vanilla: Adds depth of flavor and enhances all the other flavors, too.

How to make gluten free apple muffins

Whisk dry ingredients and make the apple mixture

In a large bowl, whisk the dry ingredients (gluten free flour blend, xanthan gum, baking powder and soda, salt, sugar, cinnamon). Toss the diced apples with cornstarch, cinnamon, and sugar. Add 2/3 of the apple mixture to the dry ingredients.

Mix in the wet ingredients, fill the muffins wells

Toss the apple mixture in the dry ingredients. Mix in the melted butter, sour cream, eggs, and vanilla. Fill the wells of a muffin tin full with the thick batter, add the rest of the diced apple mixture on top, and your muffins are ready for the oven!

Metal muffin tin with light brown muffins with front muffin broken to reveal inside

Recipe tips & tricks

Start with a 375°F oven

Give your muffins a head start on rising by preheating your oven to 375°F. After 5 minutes, reduce the temperature to 350°F until done. The temperature won’t fall right away, of course, but will slowly fall to 350°F for the remainder of the baking time, so your muffins don’t burn on the bottom.

Don’t rely only on the “toothpick test” for doneness

It’s best to bake these muffins until they’re mostly firm to the touch. The muffins are so tender inside that the “toothpick in the center” test for doneness can be misleading here.

Use a light-colored muffin tin

Light-colored aluminum muffin tins are the best for muffins that bake evenly and fully. Dark muffin tins bake the outside very quickly, so if your tin is dark-colored line the wells with cupcake liners rather than greasing them and bake at a little lower than 350°F.

side view of raw apple muffin batter with diced raw apples on top

Storage & refreshing instructions

If you store these extra tender muffins in a sealed container at room temperature, they will stay moist and tender for at least 2, if not 3 days. For longer storage, freeze them in a single layer on a baking sheet, and then pile them into a freeze-safe zip-top bag for up to 3 months.

Avoid freezer burn by squeezing as much air out of the bag as possible. To refresh frozen muffins, let defrost at room temperature, or microwave at 50% power for about 25 seconds. For a fresh-baked feeling, sprinkle defrosted muffins lightly with some lukewarm water and reheat in a 300°F toaster oven until warm.

gluten free apple muffin broken in half in brown paper liner on small white plate

Frequently asked questions

Can I make these muffins dairy free?

Try replacing the butter with Miyoko’s Kitchen vegan butter and the sour cream with your favorite dairy free alternative. You can also use dairy free plain Greek-syle yogurt in place of sour cream.

Can I replace the apples with another fruit?

Most other fruit is too tender to use in these muffins. You may be able to use Bosc pears, since they’re very firm. Just be sure they’re not too ripe or they’ll fall apart in the oven. If you’d like to use berries, try our gluten free blueberry muffins recipe instead.

Why did my muffins stick to the liners?

Did you use greaseproof muffin liners? I like “If You Care” brand paper liners because they never stick to my muffins and cupcakes. If you’re not sure if your muffin liners are greaseproof, spray the inside of each liner lightly with cooking oil spray before filling and baking. And always let your muffins cool before you try to remove the liner, or they will usually stick.

Chunky Gluten Free Apple Muffins

These gluten free apple muffins are perfectly spiced, with plenty of diced apples inside plus sour cream for a moist, tender crumb.

Course: Muffins

Cuisine: American

Prep Time: 10 minutes

Cook Time: 22 minutes

Yield: 12 muffins

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Ingredients

  • 1 ½ cups (210 g) all purpose gluten free flour blend (I used Better Batter; please click thru for full info on appropriate blends)
  • ¾ teaspoon xanthan gum omit if your blend already contains it
  • 1 ½ teaspoons baking powder
  • ¼ teaspoon baking soda
  • ¼ teaspoon kosher salt
  • 1 teaspoon ground cinnamon
  • ¼ teaspoon freshly grated nutmeg optional
  • ¾ cup (150 g) granulated sugar
  • 1 ½ cups (200 g) peeled, cored, and diced apples (about 2 medium-size apples; Granny Smith are best, Braeburn and Cortland are great, too)
  • 2 teaspoons (6 g) cornstarch
  • 8 tablespoons (112 g) unsalted butter melted and cooled
  • 1 cup (240 g) sour cream at room temperature (or plain Greek yogurt)
  • 2 (100 g (weighed out of shell)) eggs at room temperature, beaten
  • 2 teaspoons pure vanilla extract

Instructions

  • Preheat your oven to 375°F. Grease or line the wells of a standard 12-cup muffin tin and set it aside.

  • In a large bowl, combine the flour blend, xanthan gum, baking powder, baking soda, salt, 1/2 teaspoon cinnamon, optional nutmeg and 1/2 cup of the sugar. Whisk to combine well.

  • In a separate, medium-size bowl, place the diced apples and toss with the remaining 1/2 teaspoon cinnamon, remaining 1/4 cup of sugar and the cornstarch. Toss to combine.

  • Add about 2/3 of the apple mixture to the large bowl of dry ingredients, and toss to coat.

  • Create a well in the center of the dry ingredients and add the butter, sour cream, eggs and vanilla, and mix to combine. The batter will be thick.

  • Fill the prepared wells of the muffin tin all the way with the batter, and smooth the tops with wet fingers.

  • Scatter the tops with a few pieces of the remaining apple mixture each, and press gently to help the apples adhere.

  • Place in the center of the preheated oven and bake for 5 minutes. Reduce the oven temperature to 350°F for the remainder of the baking time.

  • Bake until lightly golden brown on the edges and mostly firm to the touch, about 22 minutes. The moisture in the apples baked into the top of the muffins keep these muffins very tender on top, so don’t expect even browning.

  • Allow the muffins to cool in the pan for 5 minutes before transferring to a wire rack to cool completely.

  • Store any leftovers in a sealed container at room temperature for up to 2 days; freeze for longer storage.

Nutrition

Serving: 1muffin | Calories: 239kcal | Carbohydrates: 30g | Protein: 2g | Fat: 12g | Saturated Fat: 7g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 3g | Trans Fat: 0.3g | Cholesterol: 59mg | Sodium: 157mg | Potassium: 56mg | Fiber: 1g | Sugar: 15g | Vitamin A: 401IU | Vitamin C: 1mg | Calcium: 58mg | Iron: 0.2mg

Chunky Gluten Free Apple Muffins

These gluten free apple muffins are perfectly spiced, with plenty of diced apples inside plus sour cream for a moist, tender crumb.

Course: Muffins

Cuisine: American

Prep Time: 10 minutes

Cook Time: 22 minutes

Yield: 12 muffins

Prevent your screen from going dark

Ingredients

  • 1 ½ cups (210 g) all purpose gluten free flour blend (I used Better Batter; please click thru for full info on appropriate blends)
  • ¾ teaspoon xanthan gum omit if your blend already contains it
  • 1 ½ teaspoons baking powder
  • ¼ teaspoon baking soda
  • ¼ teaspoon kosher salt
  • 1 teaspoon ground cinnamon
  • ¼ teaspoon freshly grated nutmeg optional
  • ¾ cup (150 g) granulated sugar
  • 1 ½ cups (200 g) peeled, cored, and diced apples (about 2 medium-size apples; Granny Smith are best, Braeburn and Cortland are great, too)
  • 2 teaspoons (6 g) cornstarch
  • 8 tablespoons (112 g) unsalted butter melted and cooled
  • 1 cup (240 g) sour cream at room temperature (or plain Greek yogurt)
  • 2 (100 g (weighed out of shell)) eggs at room temperature, beaten
  • 2 teaspoons pure vanilla extract

Instructions

  • Preheat your oven to 375°F. Grease or line the wells of a standard 12-cup muffin tin and set it aside.

  • In a large bowl, combine the flour blend, xanthan gum, baking powder, baking soda, salt, 1/2 teaspoon cinnamon, optional nutmeg and 1/2 cup of the sugar. Whisk to combine well.

  • In a separate, medium-size bowl, place the diced apples and toss with the remaining 1/2 teaspoon cinnamon, remaining 1/4 cup of sugar and the cornstarch. Toss to combine.

  • Add about 2/3 of the apple mixture to the large bowl of dry ingredients, and toss to coat.

  • Create a well in the center of the dry ingredients and add the butter, sour cream, eggs and vanilla, and mix to combine. The batter will be thick.

  • Fill the prepared wells of the muffin tin all the way with the batter, and smooth the tops with wet fingers.

  • Scatter the tops with a few pieces of the remaining apple mixture each, and press gently to help the apples adhere.

  • Place in the center of the preheated oven and bake for 5 minutes. Reduce the oven temperature to 350°F for the remainder of the baking time.

  • Bake until lightly golden brown on the edges and mostly firm to the touch, about 22 minutes. The moisture in the apples baked into the top of the muffins keep these muffins very tender on top, so don’t expect even browning.

  • Allow the muffins to cool in the pan for 5 minutes before transferring to a wire rack to cool completely.

  • Store any leftovers in a sealed container at room temperature for up to 2 days; freeze for longer storage.

Nutrition

Serving: 1muffin | Calories: 239kcal | Carbohydrates: 30g | Protein: 2g | Fat: 12g | Saturated Fat: 7g | Polyunsaturated Fat: 1g | Monounsaturated Fat: 3g | Trans Fat: 0.3g | Cholesterol: 59mg | Sodium: 157mg | Potassium: 56mg | Fiber: 1g | Sugar: 15g | Vitamin A: 401IU | Vitamin C: 1mg | Calcium: 58mg | Iron: 0.2mg

Thanks for stopping by!

Hi, I’m Nicole. I create gluten free recipes that really work and taste as good as you remember. No more making separate meals when someone is GF, or buying packaged foods that aren’t good enough to justify the price. At Gluten Free on a Shoestring, “good, for gluten free” just isn’t good enough! Come visit my bio!




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